SBI – Department of Systems Biology and Bioinformatics
Faculty of Computer Science and Electrical Engineering
University of Rostock
Ulmenstrasse 69 | 18057 Rostock
Germany
+49 381 498-7571
olaf.wolkenhauer@uni-rostock.de
GB-XMap: Assessing the risk of gut-brain cross-diseases
Investigating the gut-brain-axis
The gut–brain axis (GBA) provides a bidirectional homeostatic communication between the gastrointestinal tract and the central nervous system. The interdisciplinary collaboration is going to fully explore a first comprehensive GBA cross-disease map of genetic, expression and regulatory changes associated with ulcerative colitis and schizophrenia disease entities.
Dysfunction of this axis can have pathophysiological consequences. Genome-wide association studies (GWAS) have identified >300 genome-wide significant risk loci for common inflammatory bowel diseases (IBD: Crohn’s disease, ulcerative colitis, among others) and neuropsychiatric diseases (schizophrenia, bipolar disease, among others), and recently a cross-disease GWAS identified an increased risk of schizophrenia also tended to be associated with increased risk of inflammatory bowel disease. The key goal is to decipher the mechanisms of action of diseasepredisposing loci of the GBA. The e:Med consortia “Sysinflame” and “IntegraMent” have generated a wealth of DNA and mRNA data for ulcerative colitis (UC) and schizophrenia (SCZ) that awaits exploration. One objective of this project is to initiate a new strategic alliance between the e:Med centers (Bonn, Kiel) and the de.NBI partner (de.STAIR) in Rostock. The project is funded by BMBF (FKZ: 01ZX1709C )
Related publications
A benchmark of hemoglobin blocking during library preparation for mRNA-Sequencing of human blood samples
Uellendahl-Werth F, Wolfien M, Franke A, Wolkenhauer O, Ellinghaus D
Scientific Reports 2020, 10, 5630
Protein-coding variants contribute to the risk of atopic dermatitis and skin-specific gene expression
Mucha S, ... Bej S, ..., Wolfien M, ..., Wolkenhauer O, ..., Ellinghaus D